CDS

Accession Number TCMCG006C106070
gbkey CDS
Protein Id XP_013660844.1
Location complement(join(2014942..2015020,2015107..2015393,2015473..2015568,2015645..2015788,2016325..2016702,2016780..2017004,2017427..2017525,2017606..2018020,2018416..2018552,2018655..2019026))
Gene LOC106365880
GeneID 106365880
Organism Brassica napus

Protein

Length 743aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013805390.2
Definition DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description ATP binding ATP-dependent helicase RNA binding helicase nucleic acid binding zinc ion binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K16911        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko01110        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0000373        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCGACGGTGGGAGTCCCATCACTATACCAAGTCCCTCACCTTGAAACCTCCAAACCCACTTCCAAGAAGAGGTCCACTTCCTTATCTCTCTCTCTAGATAACCCTTTCTTCTCCTCTCCCTTATCTCTCCGAAGAACTCGTCTTATCCACTCTTCTCTTCTTCCTCCCTCCGCCGTGGCCACTCCCAACTCCGTTCTCAGCGAGGAAGCTTTCAAAAGCCTCGGCCTTTCCGACGAGTTCGACCTCGAGGAGGGCTCCTCCTCCGAAGACGATGGTGAAGAGCTCGCTATCTCGAAGCTTGGTTTGCCTCAGCGTCTCGGCGAGTCTCTCGAGAAGCGTGGTATCACTCACCTCTTCCCCATTCAGAGGGCTGTGTTGGTTCCTGCGCTGGAAGGACGAGACATTATAGCTCGTGCGAAGACGGGAACTGGGAAGACTTTGGCTTTCGGTATCCCTATCATCAAACGCCTCACTGAACAATCTGGAGACTACTCTGCTTTCAGGAAGTCTGGTCGTCTTCCTAAGTTCCTTGTCCTGGCGCCTACTCGAGAACTAGCTAAGCAAGTGGAGAAGGAGATTAAGGAATCTGCACCTTATTTAAGCACCGTTTGTGTATACGGTGGTGTCTCTTACACCATTCAGCAGAGTGCTTTGTCACGTGGTGTTGATGTTGTTGTTGGAACTCCTGGAAGGATCATTGACTTGATAGAAGGAAGGAGCCTCAAACTAGGTGAAGTTGAGTACTTGGTGCTTGATGAAGCTGACCAGATGCTTGCTGTTGGTTTTGAGGAAGCTGTGGAATCGATTCTTGAGAATCTCCCACAGAAGAGACAGAGTATGCTTTTCTCAGCTACTATACCTACTTGGGTGAAGAAGCTGGCGAGGAAGTATCTTGACAATCCCTTGAATATCGATCTGGTTGGTGACCAAGATGAGAAGCTTGCGGAGGGGATCAAGCTTTATGCAATCTCAGCGACATCAACATCAAAGCGCACTATTCTAAGCGACCTTATAACAGTATATGCAAAGGGTGGCAAGACCATTGTTTTTACCCAAACAAAAAGAGATGCAGATGAGGTCTCTCTAGCATTATCAAACAGCATAGCTTCTGAAGCACTTCATGGAGATATCTCTCAGCATCAAAGAGAAAGAACGCTCAACGGTTTCCGCCAAGGGAAATTCACAGTTCTAGTTGCTACTGATGTTGCGTCTCGTGGACTTGACATCCCAAACGTAGATCTAGTTATCCACTACGAACTTCCTAATGACCCTGAGACTTTTGTGCACCGGTCTGGTCGTACCGGGCGTGCAGGGAAAGAAGGCTCAGCTATTCTAATGCACTCTAGTAGCCAGAAGAGAACGGTGAGGTCTCTGGAGCGTGACGTAGGCTGCAGATTTGAGTTTATTAGCCCACCAACTGTTGGAGACTTGTTGGAGGCGTCAGCAGACCAATTGGTGGCCACTCTGAACGGCGTTCACCCTGAGTCTATAAAGTTTTTCTCAGCAACTGCTCAAAAACTGTTTGAGGAAAAAGGAACAGATGCCTTAGCTGCAGCTCTGGCTCACCTGAGTGGTTTCTCTCAGCCACCTTCATCTAGATCTCTCCTCAGTCATGAGCAGGGATGGGTAACTTTGCAGTTGATACGAGATCCAACAAACGCTAGAGGCTTCCTGTCTGCGAGGTCTGTCACTGGCTTTCTTTCTGATGTTTACCGTCCAGCTGCAGATGAAGTTGGAAAAATCTTCATGATCGCAGATGAAAGGGTGCAAGGAGCTGTTTTTGATCTACCAGAGGACATAGCTAAAGAGCTGTTAGAGAAAGAAGTGCCAGAAGGAAACAGTCTATCCATGATTACAAAGTTGCCTCCGTTGCAAGATGATGGACCGTCTAGTGATAATTATGGACGGTTCTCTAGCAGAGACAGGATGCCTAGAGGAGGAGGAGGTTCTAGAGGGTCGAGATTTGGCGGTAGAGGAGGCTCATCACGAGGACGTGATGATGACAGAAGAAGTAGAAGCAGTGGTAGTGGAGGAAGCAGCTGGTCCCGTGGTGGTGGTGGTTCCAGAGGAAGTTCTGATGATTGGTTGATTGGTGGTGGTAGTGAGAGAAGATCATCATCAAGCAGCAGAGGTCCTTCCAGGGAGAGGAGTTTTGGAGGTGCTTGCTTCACTTGTGGAAGCTCAGGACACAGGGCAGCTGATTGTCCTGATAAGAGAGGGTTTTAA
Protein:  
MASTVGVPSLYQVPHLETSKPTSKKRSTSLSLSLDNPFFSSPLSLRRTRLIHSSLLPPSAVATPNSVLSEEAFKSLGLSDEFDLEEGSSSEDDGEELAISKLGLPQRLGESLEKRGITHLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKRLTEQSGDYSAFRKSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALSRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPQKRQSMLFSATIPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADQLVATLNGVHPESIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPTNARGFLSARSVTGFLSDVYRPAADEVGKIFMIADERVQGAVFDLPEDIAKELLEKEVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFGGRGGSSRGRDDDRRSRSSGSGGSSWSRGGGGSRGSSDDWLIGGGSERRSSSSSRGPSRERSFGGACFTCGSSGHRAADCPDKRGF